caris life sciences - Amazon AWS

0 downloads 230 Views 255KB Size Report
has advanced, the company's needs for managing high- performance analytics and rapidly growing data storage have grown e
CASE STUDY FOR HEALTH

CARIS LIFE SCIENCES RAPIDLY DEPLOYS A HIGH-PERFORMANCE COMPUTING SOLUTION TO ADVANCE PERSONALIZED CARE FOR PATIENTS

OVERVIEW THE NEED As it worked to transform personalized cancer treatment, Caris Life Sciences needed to more efficiently process, analyze, manage and store terabytes of laboratory-generated data each day. THE SOLUTION The company deployed a highperformance computing solution with NeXtScale System™ servers. THE BENEFIT The solution enabled Caris Life Sciences to speed up the quest for better treatment options for patients with an improved ability to make sense of vast, complex and everchanging volumes of molecular data.

SOLUTION COMPONENTS HARDWARE • NeXtScale System™ nx360 M4 with Intel® Xeon® processors SOFTWARE • IBM® General Parallel File System (GPFS™) • IBM Platform™ HPC

Caris Life Sciences is a leading biosciences company fulfilling the promise of precision medicine through quality and innovation. The company analyzes molecular data from a patient’s tumor with biomarker/drug associations to provide clinically actionable information to help doctors personalize treatment for cancer patients. To date, 65,000 plus patients have been profiled, ordered by nearly 7,000 oncologists in 63 countries. Headquartered in Irving, Texas, Caris offers services throughout the US, Europe, Australia and other international locations.

A LEADER IN MEDICAL SCIENCE — AND IN USING BIG DATA As the molecular profiling Caris performs for patients has advanced, the company’s needs for managing highperformance analytics and rapidly growing data storage have grown exponentially. To meet these challenges, Caris needed a scalable, massively parallel computing environment along with a petabyte-scale storage solution to manage both data complexity and overall size. “We are a company in the vanguard of molecular diagnostics,” notes Dr. George Poste, vice chairman at Caris Life Sciences, “but that also requires us to be in the vanguard of medical information services, because our product is the information used to make a decision on how to treat a patient.” Adds Dr. David Spetzler, vice president of research and development, “We test so many different features of the cancer and integrate that information in a complex bioinformatic pipeline that we’re the heralds and the generators of what people call ‘big data.’ We’re generating terabytes of data per day on individual patient samples. So when people talk about big data, that’s small to us. We are generating huge data.”

BUSINESS PARTNER • Re-Store

Sponsored by Lenovo and Intel®

Visit www.lenovo.com/datacenter for more details.

CASE STUDY FOR HEALTH

“The reason why Caris Life Sciences invested in this computing system,” says Dr. David Spetzler, vice president of research and development, “is that we have a vision of making personalized medicine something that is an integrated part of all of healthcare.”

To handle those data needs — which typically involve storing terabytes of data for patients — Caris needed computing and storage environments that could also accommodate different workloads from other business units. It needed to help ensure compliance with regulatory guidelines such as Clinical Laboratory Improvement Amendments (CLIA) and standards of the College of American Pathologists (CAP), International Organization for Standardization (ISO) and the US Food and Drug Administration (FDA). It needed a solution that would integrate with other computing and storage bioinformatics operations, enhance collaboration and support organizational growth with access from multiple locations.

RAPID IMPLEMENTATION TO MEET URGENT NEEDS Importantly, Caris also needed a solution that it could implement quickly. With its “technology-agnostic” approach using a wide variety of methodologies to generate optimal patient data, the company’s existing environment was rapidly becoming inadequate. Caris had already implemented new leading-edge sequencing appliances, and data from those appliances was being generated and stored. At that point, Caris met with Business Partner Re-Store. Working together, the companies developed the scalable, data-aware, secure infrastructure necessary for molecular analysis and data storage. Installation of the solution was completed in less than two months after the first meeting. “The Re-Store team worked hand in hand with our IT department to very, very quickly bring the system up,” states Dr. Spetzler. “It was an incredibly useful relationship. Time is of the essence for us. We’re fighting a deadly disease and we don’t have time to waste.”

SUPERCOMPUTING POWER FOR TODAY AND TOMORROW Caris next-generation sequencing (NGS) processes are fully supported by super-computing technologies, including processing by NeXtScale System servers powered by two Intel® Xeon® E5-2600 v2 series processors; IBM® General Parallel File System (GPFS™) software and management with IBM Platform™ HPC. Massive scalability provides 40 core processors per blade — which at initial implementation translated to 320 processors for quickly analyzing data.

Sponsored by Lenovo and Intel®

Visit www.lenovo.com/datacenter for more details.

CASE STUDY FOR HEALTH

“Time is of the essence for us. We’re fighting a deadly disease and we don’t have time to waste.” Dr. David Spetzler Vice President of Research and Development, Caris Life Sciences

The result is a computing and storage system that can be provisioned and re-provisioned nondisruptively. “One of the key features of the architecture that attracted us to the NeXtScale System was the fully integrated information storage system,” says Dr. Spetzler. “Couple that with the underlying core processing speed and you have a very robust system capable of doing a massive amount of multi-threaded analysis on this incredible dataset that we generate every day.” For Caris, powerful analytics enables faster insight as they study the genomic alterations that may be driving a cancer — and as they identify therapeutic strategies that enable oncologists to improve treatment. For patients, analytics means the ability to obtain more accurate testing results faster to help fight their disease more effectively. “The physician of the future will be dependent upon analytics and clinical decision support systems,” says Dr. Poste. “For certain diseases we’re already at a point where computers are more accurate in diagnosing the disease than most physicians. So as you fast-forward five, 10, 15 years, data is going to translate to more and more robust predictive datasets.” Concludes Dr. Spetzler: “Caris Life Sciences invested in this computing system because we have a vision for the future of making personalized medicine not just accessible to those patients who are working with great oncologists but also something that is an integrated part of all of healthcare.”

To learn more about NeXtScale System, contact your Business Partner or visit: www.lenovo.com/datacenter To learn more about Lenovo Business Partner Re-Store, visit: www.re-store.net To learn more about Caris Life Sciences, visit: www.carislifesciences.com, or follow them on Twitter @carisls © 2016 Lenovo. All rights reserved. Availability: Offers, prices, specifications and availability may change without notice. Lenovo is not responsible for photographic or typographic errors. Warranty: For a copy of applicable warranties, write to: Warranty Information, 500 Park Offices Drive, RTP, NC, 27709, Attn: Dept. ZPYA/B600. Lenovo makes no representation or warranty regarding third-party products or services. Trademarks: Lenovo, the Lenovo logo, and NeXtScale are trademarks or registered trademarks of Lenovo. Intel, the Intel logo, Xeon and Xeon Inside are registered trademarks of Intel Corporation in the U.S. and other countries. Other company, product, and service names may be trademarks or service marks of others. Sponsored by Lenovo and Intel®

Visit www.lenovo.com/datacenter for more details.